| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Agulhas Current | Sea/Bay/Gulf | native | 4281 |
| Arabian Sea | Sea/Bay/Gulf | native | 5316 |
| Calamianes Islands | Sea/Bay/Gulf | native | 48613 |
| Coral Sea and GBR | Sea/Bay/Gulf | native | 48497 |
| Great Barrier Reef | Sea/Bay/Gulf | native | 48497 |
| Gulf of Aden | Sea/Bay/Gulf | native | 11441 |
| Indian Ocean | Sea/Bay/Gulf | native | 4281 |
| Milne Bay | Sea/Bay/Gulf | native | 41464 |
| Northeast Australian Shelf | Sea/Bay/Gulf | native | 4281 |
| Pacific Ocean | Sea/Bay/Gulf | native | 4281 |
| Persian Gulf | Sea/Bay/Gulf | native | 5316 |
| Red Sea | Sea/Bay/Gulf | native | 84159 |