| Species | Name Used in Reference |
|---|---|
| Microphysogobio alticorpus Bănărescu & Nalbant, 1968 | Microphysogobio alticorpus (p. 11) |
| Microphysogobio chenhsienensis (Fang, 1938) | Microphysogobio chenhsienensis (p. 11) |
| Microphysogobio elongatus (Yao & Yang, 1977) | Microphysogobio elongatus (p. 11) |
| Microphysogobio exilicauda (Jiang & Zhang, 2013) | Microphysogobio exilicauda (p. 1) |
| Microphysogobio kachekensis (Oshima, 1926) | Microphysogobio kachekensis (p. 11) |
| Microphysogobio kiatingensis (Wu, 1930) | Microphysogobio kiatingensis (p. 11) |
| Microphysogobio pseudoelongatus Zhao & Zhang, 2001 | Microphysogobio pseudoelongatus (p. 11) |
| Microphysogobio xianyouensis Huang, Chen & Shao, 2016 | Microphysogobio xianyouensis (p. 1) |
| Microphysogobio zhangi Huang, Zhao, Chen & Shao, 2017 | Microphysogobio zhangi (p. 3;fig.2) |