| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Agulhas Current | Sea/Bay/Gulf | native | 7247 |
| Andaman Sea | Sea/Bay/Gulf | native | 90102 |
| Australian | Zoogeographic realm | native | 6192 |
| Davao Gulf | Sea/Bay/Gulf | native | 43437 |
| Ethiopian | Zoogeographic realm | native | 7247 |
| Indian Ocean | Sea/Bay/Gulf | native | 7247 |
| Indonesian Sea | Sea/Bay/Gulf | native | 4966 |
| Oriental | Zoogeographic realm | native | 31075 |
| Pacific Ocean | Sea/Bay/Gulf | native | 4966 |
| Peng-hu Island | Sea/Bay/Gulf | native | 55073 |
| Red Sea | Sea/Bay/Gulf | native | 12541 |
| San Pedro Bay | Sea/Bay/Gulf | native | 46241 |
| Somali Coastal Current | Sea/Bay/Gulf | native | 7247 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Southern China | Sea/Bay/Gulf | native | 94637 |
| Sulu-Celebes Sea | Sea/Bay/Gulf | native | 45419 |