| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Australian | Zoogeographic realm | native | 7050 |
| Indonesian Sea | Sea/Bay/Gulf | native | 419 |
| Laguna de Bay | Lake | native | 84480 |
| Naujan Lake | Lake | native | 13446 |
| Northeast Australian Shelf | Sea/Bay/Gulf | native | 7050 |
| Oriental | Zoogeographic realm | endemic | 7050 |
| South China Sea | Sea/Bay/Gulf | native | 419 |
| Taal Lake | Lake | native | 12165 |